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Table 1 16S rRNA gene copy numbers of bacterial groups by qPCR in reactors during periods 2-4

From: Synergistic effects of Bifidobacterium thermophilum RBL67 and selected prebiotics on inhibition of Salmonella colonization in the swine proximal colon PolyFermS model

 

Bacterial group, log10copies/mL effluent

Treatment

Bifidobacterium thermophilum

Bifidobacteriumspp.

Bacteroides-Prevotella

Enterobacteriaceae

Lactobacillus/Leuconostoc/Pediococcusspp.

ClostridiumCluster IV

total 16S rRNA genes

PERIOD 2

       

Control

n.d.

6.4±0.2

10.3±0.1

9.6±0.1

7.6±0.1

10.0±0.1

10.5±0.1

N-15

n.d.

6.5±0.2

10.3±0.03

9.6±0.1

8.2±0.3*

10.1±0.1

10.5±0.2

RBL67

7.6±0.1

8.3±0.2*

10.2±0.1

10.0±0.1*

7.6±0.2

10.0±0.1

10.6±0.2

FOS

n.d.

6.0±0.2*

10.4±0.04

9.9±0.2*

7.4±0.1

10.0±0.03

10.7±0.1

R-FOS

8.1±0.1

8.7±0.2*

10.2±0.2

9.9±0.2

7.4±0.2*

10.0±0.1

10.7±0.1

PERIOD 3

       

Control

n.d.

6.7±0.1

10.0±0.03

10.0±0.1

8.2±0.3

10.0±0.02

10.6±0.1

N-15

n.d.

6.9±0.2

10.1±0.2

9.8±0.1*

8.2±0.2

10.1±0.2

10.6±0.2

RBL67

7.7±0.1

7.7±0.1*

10.1±0.2

10.2±0.1*

8.6±0.2

10.1±0.1

10.6±0.2

GOS

n.d.

6.6±0.04

9.9±0.2

9.7±0.2*

8.1±0.2

10.0±0.5

10.5±0.1*

R-GOS

7.7±0.1

8.0±0.1*

10.0±0.2

9.9±0.2

8.3±0.3

10.1±0.3

10.5±0.2

PERIOD 4

       

Control

n.d.

6.4±0.1

10.0±0.2

10.0±0.2

8.0±0.2

9.5±0.02

10.6±0.3

N-15

n.d.

7.0±0.1*

9.9±0.1

9.8±0.1

8.1±0.3

9.8±0.1

10.5±0.1

R-MOS

7.6±0.1

8.1±0.1*

9.8±0.3

9.8±0.2

8.2±0.4

9.5±0.3

10.5±0.4

R-FOS

8.0±0.1

8.4±0.1*

9.8±0.1

9.9±0.2

8.4±0.2*

9.7±0.1

10.5±0.1

R-GOS

7.8±0.1

8.3±0.03*

9.9±0.1

10.0±0.2

8.3±0.2

9.8±0.2

10.6±0.3

  1. *Bacterial populations significantly different (P?<?0.05) from CR within a period; Values are given as means±SD (log10 copy numbers/mL reactor effluent) calculated from three consecutive days (days 24) during N-15 challenge periods.
  2. N-15: Salmonella N-15 without pro- or prebiotic; RBL67: B. thermophilum RBL67 alone; FOS: FOS alone; R-FOS: B. thermophilum RBL67 + FOS; GOS: GOS alone; R-GOS: B. thermophilum RBL67 + GOS; R-MOS: B. thermophilum RBL67 + MOS.