Fig. 2
From: Effect of antibiotic pre-treatment and pathogen challenge on the intestinal microbiota in mice
Assessment of change in gut microbiome following C. jejuni challenge. Mice were challenged with either PBS (cage 1), or C. jejuni (cages 2 and 3) at 7 weeks of age. Fecal pellets were collected serially, DNA extracted, and HTS performed on the Illumina Miseq platform. β-diversity (column A) α-diversity (column B). and relative taxon abundance at the genus level (color-coded, column C) are shown. Light blue indicates control group (cage 1); dark blue indicates C. jejuni group (cage 2); red indicates another C. jejuni group (cage 3)