Table 5 Multilocus sequence typing results of the 28 Giardia duodenalis-positive samples randomly selected for genotyping purposes in the present survey. Main demographic (gender, age) and clinical (hospital of origin, diarrhoea) data of the patients are indicated. GenBank accession number are provided
Genetic loci | ||||||||
|---|---|---|---|---|---|---|---|---|
Sample Id. | Gender | Age (yrs.) | Clinical setting | Diarrhoea | gdh | bg | tpi | Assigned genotype |
IRSUM1 | Male | 2 | IH | Yes | BIII (OQ202298) | B (OQ202284) | BIV (OQ202308) | BIII/BIV |
IRSUM2 | Female | 2 | IH | Yes | – | AIII (OQ202297) | AII (OQ202319) | AII/AIII |
IRSUM3 | Female | 1 | IH | Yes | BIV (OQ202299) | B (OQ202285) | BIV (OQ202309) | BIV |
IRSUM4 | Female | 2 | IH | No | BIV (OQ202300) | B (OQ202286) | – | BIV |
IRSUM5 | Female | 7 | IH | No | – | – | AII (OQ202320) | AII |
IRSUM6 | Male | 2 | IH | Yes | BIV (OQ202307) | – | AII (OQ202321) | AII + BIV |
IRSUM7 | Male | 23 | CRL | No | – | – | – | Unknown |
IRSUM8 | Female | 28 | KH | No | – | – | AII (OQ202322) | AII |
IRSUM9 | Female | 7 | KH | Yes | – | AIII (OQ202296) | – | AIII |
IRSUM10 | Female | 4 | IH | No | AII (OQ202301) | AIII (OQ202287) | AII (OQ202310) | AII/AIII |
IRSUM11 | Male | 4 | IH | Yes | AII (OQ202302) | – | – | AII |
IRSUM12 | Male | 2 | IH | No | – | B (OQ202288) | – | B |
IRSUM13 | Female | 2 | IH | Yes | BIV (OQ202303) | B (OQ202289) | BIII (OQ202311) | BIII/BIV |
IRSUM14 | Male | 2 | IH | No | AII (OQ202304) | AII (OQ202290) | AII (OQ202312) | AII |
IRSUM15 | Female | 8 | IH | Yes | – | AIII (OQ202291) | AII (OQ202313) | AII/AIII |
IRSUM16 | Male | 6 | IH | Yes | – | – | – | Unknown |
IRSUM17 | Female | 2 | IH | No | – | – | – | Unknown |
IRSUM18 | Male | 6 | IH | No | – | – | – | Unknown |
IRSUM19 | Male | 2 | IH | Yes | AII (OQ202305) | AIII (OQ202292) | AII (OQ202314) | AII/AIII |
IRSUM20 | Female | 6 | IH | Yes | – | AIII (OQ202293) | AII (OQ202315) | AII/AIII |
IRSUM21 | Female | 9 | IH | No | AII (OQ202306) | – | – | AII |
IRSUM22 | Female | 1 | IH | No | – | – | B (OQ202316) | B |
IRSUM23 | Female | 5 | IH | Yes | – | B (OQ202294) | – | B |
IRSUM24 | Male | 7 | IH | No | – | B (OQ202295) | – | B |
IRSUM25 | Female | 5 | IH | No | – | – | BIII (OQ202317) | BIII |
IRSUM26 | Female | 4 | IH | No | – | – | – | Unknown |
IRSUM27 | Female | 5 | IH | Yes | – | – | AII (OQ202323) | AII |
IRSUM28 | Male | 8 | IH | No | – | – | AII (OQ202318) | AII |