Table 1 Genomic features of Salmonella enterica subsp. enterica serovars isolated from poultry
Strain no | Serovar | Isolation source | ST (MLST) | Antimicrobial resistance genes | Plasmid profile | SPIs | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
Aminoglycoside | Tetracycline | Phenicol | Sulfonamide | Trimethoprim | Quinolone | ||||||
S9 | S. Kentucky | Liver | 198 | aac(6′)-Iaa | tet(A) | floR | GyrA (S83F, D87N) ParC (T57S, S80I) | No hit found | C63PI, SPI-1,2,3,5,9 | ||
S10 | S. Enteritidis | Liver | 11 | aac(6′)-Iaa | GyrA D87Y | IncFIB(S)-IncFII(S) | C63PI, CS54, SPI-1,2,3,5,9,10,13,14 | ||||
S11 | S. Kentucky | Liver | 198 | aac(6′)-Iaa, aph(3′)-Ia | tet(A) | floR | Sul1 | dfrA1 | GyrA (S83F, D87N) Par C (T57S, S80I) | IncI1-I(α) | C63PI, SPI-1,2,3,5,9 |
S12 | S. Enteritidis | Liver | 8524 | aac(6′)-Iaa | GyrA D87N | IncFIB(S)-IncFII(S) | C63PI, CS54, SPI-1,2,3,4,5,9,10,13,14 | ||||
S13 | S. Enteritidis | Liver | 11 | aac(6′)-Iaa | GyrA D87Y | IncFIB(S) | C63PI, CS54, SPI-1,2,3,4,5,9,10,13,14 | ||||
S14 | S. Enteritidis | Liver | 11 | aac(6′)-Iaa | GyrA D87Y | IncFIB(S)-IncFII(S) | C63PI, CS54, SPI-1,2,3,4,5,9,10,13,14 | ||||
S15 | S. Enteritidis | gallbladder | 11 | aac(6′)-Iaa | GyrA D87Y | IncFIB(S)-IncFII(S) | C63PI, CS54, SPI-1,2,3,4,5,9,10,13,14 | ||||
S16 | S. Enteritidis | Liver | 11 | aac(6′)-Iaa | GyrA D87N | IncFIB(S) | C63PI, CS54, SPI-1,2,3,4,5,9,10,13,14 | ||||